Error in output[[i]] : subscript out of bounds #58
Description
When I try to run R1 I get this error. Does anyone know what could be happening?
Code:
R1: Running Team Causality's code from the DREAM challenge on disease module identification
[1] "/R1_code/sub-challenge1"
Attaching package: 'igraph'
The following objects are masked from 'package:stats':
decompose, spectrum
The following object is masked from 'package:base':
union
[1] "Read input finished!"
[1] "Clustering start!"
expected no. of edges:1416619, xadj[nvtxs]:1337981
Input graph information ---------------------------------------------------
Name: test.txt, #Vertices: 21879, #Edges: 668990
Output shall be placed in the file output.txt
Clustering....
Coarsened 20 levels
Number of vertices in coarsest graph:798
Done level 20
Done level 19
Done level 18
Done level 17
Done level 16
Done level 15
Done level 14
Done level 13
Done level 12
Done level 11
Done level 10
Done level 9
Done level 8
Done level 7
Done level 6
Done level 5
Done level 4
Done level 3
Done level 2
Done level 1
Done level 0
Clusters: 16 N-Cut: 10.108 AvgN-Cut: 0.632 Balance in cluster sizes: 2.24 Std.Deviation in cluster sizes: 741.13 Coefficient_of_Variation: 0.54
Output is written to file: output.txt
Timing Information --------------------------------------------------
I/O: 0.030
Partitioning: 2.814 (MLR-MCL time)
Total: 2.849
[1] 14
Error in output[[i]] : subscript out of bounds
Calls: main
Execution halted