diff --git a/cwl_adapters/file-renaming_io.yml b/cwl_adapters/file-renaming_io.yml new file mode 100644 index 0000000..e90e971 --- /dev/null +++ b/cwl_adapters/file-renaming_io.yml @@ -0,0 +1,3 @@ +filePattern: .*_{row:c}{col:dd}_s{s:d}_w{channel:d}.*.ome.tif +mapDirectory: raw +outFilePattern: x{row:dd}_y{col:dd}_p{s:dd}_c{channel:d}.ome.tif