From c3966c5ee28abcd7211d38819217265d3332fd98 Mon Sep 17 00:00:00 2001 From: Guy Shakhar Date: Sun, 7 Sep 2025 11:30:41 +0300 Subject: [PATCH 1/2] Create meta.yaml meta yaml for treetag --- packages/treetag/meta.yaml | 20 ++++++++++++++++++++ 1 file changed, 20 insertions(+) create mode 100644 packages/treetag/meta.yaml diff --git a/packages/treetag/meta.yaml b/packages/treetag/meta.yaml new file mode 100644 index 00000000..2f2e842b --- /dev/null +++ b/packages/treetag/meta.yaml @@ -0,0 +1,20 @@ +name: TreeTag +description: | + Fast hierarchical cell-type tagging for single-cell data using YAML ontologies and marker dictionaries. + Works with AnnData/Scanpy. Includes marker pruning, KNN-based smoothing, and optional doublet detection. +project_home: https://github.com/valleyofdawn/TreeTag +documentation_home: https://github.com/valleyofdawn/TreeTag#readme +tutorials_home: https://github.com/valleyofdawn/TreeTag#readme +install: + pypi: treetag +tags: + - annotation + - cell-type + - scanpy + - markers +license: MIT +version: v0.1.1 +authors: + - valleyofdawn +test_command: | + pip install . && pytest -q From 85215564b95f01d596380a7f3052bead6a72551f Mon Sep 17 00:00:00 2001 From: "Philipp A." Date: Mon, 15 Sep 2025 09:24:12 +0200 Subject: [PATCH 2/2] Update packages/treetag/meta.yaml --- packages/treetag/meta.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/packages/treetag/meta.yaml b/packages/treetag/meta.yaml index 2f2e842b..74974895 100644 --- a/packages/treetag/meta.yaml +++ b/packages/treetag/meta.yaml @@ -17,4 +17,4 @@ version: v0.1.1 authors: - valleyofdawn test_command: | - pip install . && pytest -q + pip install '.[test]' && pytest -q