LEGACY1 Manuscript 2025
Contents:
- 01_Figure1: files used for Figure 1
- 01_Genotyping: code used for genotyping and admixture
- 02-1_panpipes_yml: all Panpipes yml files for single-cell processing
- 02-2_annotation: all files used for annotation figure
- 03_Figure3: code used for differential abundance MASC and TCR
- 04_Figure 4: code used for cNMF
- 05-RefMapping: code used to reference map public available LN FNA dataset
- Supplemental: code used for clinical metadata correlations