Update snakemake requirement from ==7.8.* to >=7.8,<7.22

[dependabot]

Updates the requirements on snakemake to permit the latest version.

Release notes

Sourced from snakemake's releases.

v7.21.0

7.21.0 (2023-01-30)

Features

• ability to encode paramspaces into a single wildcard, via the newly introduced single_wildcard argument of Paramspace. (#2069) (728ab3c)
• allow input, output, and params to be used in functions passed to report mark arguments (#2081) (93ff8b6)

Bug Fixes

• more robust encoding of params in persistent metadata storage. This way, pandas parameters do not lead to spurious rerun triggers. (#2080) (106a4c3)
• more robust parsing of sacct output in slurm executor (#2036) (fe651f8)
• Postprocess job groups in toposorted order for correct touch times (#2073) (10b5849)

Changelog

Sourced from snakemake's changelog.

7.21.0 (2023-01-30)

Features

• ability to encode paramspaces into a single wildcard, via the newly introduced single_wildcard argument of Paramspace. (#2069) (728ab3c)
• allow input, output, and params to be used in functions passed to report mark arguments (#2081) (93ff8b6)

Bug Fixes

• more robust encoding of params in persistent metadata storage. This way, pandas parameters do not lead to spurious rerun triggers. (#2080) (106a4c3)
• more robust parsing of sacct output in slurm executor (#2036) (fe651f8)
• Postprocess job groups in toposorted order for correct touch times (#2073) (10b5849)

7.20.0 (2023-01-18)

Features

• add tes token (#1966) (59a8fa0)
• Add token auth to GitLab/GitHub hosting providers (#1761) (e03a3b4), closes #1301
• allow for human friendly resource definitions (e.g. mem="5GB", runtime="1d") (#1861) (24610ac)

Bug Fixes

• 🐛 - fix hyperlink (#2046) (9519d31)
• Catch missing error stream in Slurm executor (#2063) (c21fc7e)
• correctly parse empty values in config cli (#2032) (1b0689d)
• Correctly parse UserDicts in executors (#2016) (e3926fa)
• Fix handling of --jobs in no-exec state (#2029) (e8e8222)
• make --show-failed-logs handle empty log files (#2039) (683c6f2), closes #2023
• make python version check more robust (#2058) (e685621)
• parsing error when last line is comment (#2054) (a928dd4)
• prevent overriding of retries when set to 0 (#2053) (a328f3e)
• propagate attempt count from group to subjobs (#2052) (da3f1c0)
• remove overflow from rulegraph div in report (9a0aaa7)
• skip type checks of missing dir in touch mode (#2051) (ae00c25)
• slurm default_resources quoting (#2043) (47d3fc3)
• Update list of python versions in classifiers (#2020) (7a98100)
• use short argument name for --chdir for compatibility with Slurm <=v17 (#2040) (a9ed3ec)

Documentation

• Fix typo in SLURM help text (#2049) (79b7025)
• mention XDG_CACHE_HOME (#2057) (ec2ef45)

7.19.1 (2022-12-13)

... (truncated)

Commits

• 8f79f22 chore(main): release 7.21.0 (#2074)
• 93ff8b6 feat: allow input, output, and params to be used in functions passed to repo...
• 106a4c3 fix: more robust encoding of params in persistent metadata storage. This way,...
• ac83023 chore(deps): Bump amannn/action-semantic-pull-request from 4.6.0 to 5.0.2 (#1...
• fe651f8 fix: more robust parsing of sacct output in slurm executor (#2036)
• 10b5849 fix: Postprocess job groups in toposorted order for correct touch times (#2073)
• 728ab3c feat: ability to encode paramspaces into a single wildcard, via the newly int...
• 1c9ea65 chore(main): release 7.20.0 (#2018)
• d326758 refactor: move static metadata (again) to setup.cfg (#2067)
• c21fc7e fix: Catch missing error stream in Slurm executor (#2063)
• Additional commits viewable in compare view

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[dependabot]

Superseded by #23.