Releases: UCSFVisionResearch/ObjectFinder
Releases · UCSFVisionResearch/ObjectFinder
ObjectFinder v4.0
Packaged ObjectFinder into a matlab app (requires MATLAB R2016b+)
Added GUI using app designer (requires MATLAB R2016b+)
Sholl analysis calculation for Skeleton
GUI allows to save plot data as Excel table in "results" folder
GUI allows to plot skeleton+objects in vector format for publication
GUI allows plotting Density (linear or by depth) of objects
GUI allows plotting in a separate window so plots can be saved
GUI allows plotting heatmap if linear density alog skeleton
additional scripts to plot objects density and size across experiments
Do not ask which skel to select if only one is available in Imaris
if SG.PassI does not exists, load SG.PassF by default in imaris
Don't ask where to save skel/dots/mask when exporting from Imaris
Pruned filterObjects from all suprefluous code
Moved SG.mat to the main folder, now called Filter.mat
Filter.PassF contains flags of most recent passing opjects
removed dependency from dist.m and cfigure.m
removed distinction between PassF and PassI, now last passing is PassF
removed "find" folder
removed "temp" folder
removed on-screen plots from groupFacingObjects and filterObjects