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Pull requests: bgruening/galaxytools

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Pull requests list

Fix bug in splitting fasta by chunks
#1742 opened Jan 6, 2026 by natefoo Loading…
Add carveme
#1741 opened Jan 6, 2026 by lhtxa Loading…
Add Cleaverna tool
#1739 opened Dec 26, 2025 by reyhaneh-tavakoli • Draft
15
Updating tools/rna_tools/sortmerna from version 4.3.6 to 4.3.7
#1737 opened Dec 22, 2025 by gxydevbot Loading…
Updating tools/cellpose_v4 from version 4.0.7 to 4.0.8
#1736 opened Dec 22, 2025 by gxydevbot Loading…
[DO NOT MERGE] MWE for image_diff issue
#1733 opened Dec 12, 2025 by kostrykin • Draft
Restrict number of GPUs
#1725 opened Dec 4, 2025 by anuprulez Loading…
5
Updating tools/flexynesis from version 1.1.3 to 1.1.6
#1724 opened Dec 1, 2025 by gxydevbot Loading…
Update GitHub Actions deployment conditions
#1720 opened Nov 13, 2025 by arash77 Loading…
6
Add BioStudies upload tool
#1716 opened Nov 6, 2025 by davelopez Loading…
Feat: Add two additional cellprofiler modules
#1714 opened Nov 5, 2025 by rmassei Loading…
2
Yolo training : Add the ability to choose your own model
#1706 opened Oct 30, 2025 by TuturBaba Loading…
25
Add credential support to chatgpt tool
#1702 opened Oct 29, 2025 by arash77 Loading…
Coreutils sort - Add end column and character range functionality
#1694 opened Oct 22, 2025 by RZ9082 Loading…
@RZ9082
5
Exploring the addition of groups and their purpose in YOLO configuration
#1687 opened Oct 14, 2025 by TuturBaba Loading…
1
Updating tools/image_processing/imagemagick from version 7.1.2-2 to 7.1.0.43
#1677 opened Sep 8, 2025 by gxydevbot Loading…
6
Updating tools/llm_hub from version 1.101.0 to 2.14.0
#1676 opened Sep 1, 2025 by gxydevbot Loading…
27
update rbpbench
#1658 opened Jul 17, 2025 by PlushZ Loading…
2
aggregated updates to gnu-coreutils
#1652 opened Jul 7, 2025 by nilchia Loading…
19
Updating tools/hictk from version 2.0.2 to 2.2.0
#1606 opened Apr 14, 2025 by gxydevbot Loading…
8
Fixed Tiara tool error in certain cases
#1595 opened Mar 18, 2025 by daduijker Loading…
10
lint fixes for flux and salmon
#1594 opened Mar 15, 2025 by bgruening • Draft
fix lint
#1590 opened Mar 8, 2025 by bgruening Loading…
Updating tools/bioimaging from version 2.4.1 to 2.6.0
#1578 opened Feb 17, 2025 by gxydevbot Loading…
1
tranfer group_humann2 tool
#1568 opened Jan 17, 2025 by bernt-matthias Loading…
5
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