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apply one more search round for the parallel version Build and test #78: Commit f6ed49e pushed by trongnhanuit
1d 0h 0m 1s local_refs
local_refs
1d 0h 0m 1s
revert to the old mergeUpperLower Build and test #77: Commit 4e1bd80 pushed by trongnhanuit
1d 0h 0m 1s local_refs
local_refs
1d 0h 0m 1s
revert to the old mergeTwoLowers Build and test #76: Commit 5b2ab73 pushed by trongnhanuit
1d 0h 0m 1s local_refs
local_refs
1d 0h 0m 1s
update calculateSubTreePlacementCost Build and test #75: Commit 758164e pushed by trongnhanuit
1d 0h 0m 2s local_refs
local_refs
1d 0h 0m 2s
Show alignment information Build and test #74: Commit 315aed5 pushed by trongnhanuit
1d 0h 0m 1s parallelization
parallelization
1d 0h 0m 1s
fix memory leaks Build and test #73: Commit 7861870 pushed by trongnhanuit
1d 0h 0m 2s local_refs
local_refs
1d 0h 0m 2s
Optimization: avoid creating duplicate vector of local refs Build and test #72: Commit 1e4f395 pushed by trongnhanuit
1d 0h 0m 1s local_refs
local_refs
1d 0h 0m 1s
Change SeqRegionsMem from vector to deque to preserve the pointer to … Build and test #71: Commit bec0172 pushed by trongnhanuit
1d 0h 0m 1s local_refs
local_refs
1d 0h 0m 1s
Bug fixed: rebuild sample regions for the second round of sample plac… Build and test #70: Commit 478174c pushed by trongnhanuit
1d 0h 0m 1s local_refs
local_refs
1d 0h 0m 1s
Bug fixed: use the right local ref when the best placement for a samp… Build and test #69: Commit a900cc8 pushed by trongnhanuit
1d 0h 0m 22s local_refs
local_refs
1d 0h 0m 22s
Avoid duplicating the computations of totalLh and add debug messages Build and test #68: Commit 0427a23 pushed by trongnhanuit
1d 0h 0m 2s local_refs
local_refs
1d 0h 0m 2s
bug fixed when merging two local references, using the right direction Build and test #67: Commit c3ed24a pushed by trongnhanuit
1d 0h 0m 1s local_refs
local_refs
1d 0h 0m 1s
bug fixed: update subtree (after applying an SPR) due to local ref ch… Build and test #66: Commit e270145 pushed by trongnhanuit
1d 0h 0m 2s local_refs
local_refs
1d 0h 0m 2s
comment out unused code 5 Build and test #65: Commit 2e58bf3 pushed by trongnhanuit
1d 0h 0m 1s local_refs
local_refs
1d 0h 0m 1s
update collapseOneZeroLeaf() Build and test #64: Commit cada4b6 pushed by trongnhanuit
1d 0h 0m 1s local_refs
local_refs
1d 0h 0m 1s
update calSiteLhDiff() and its relevant functions Build and test #63: Commit e9a709e pushed by trongnhanuit
1d 0h 0m 2s local_refs
local_refs
1d 0h 0m 2s
update connectSubTree2Branch() Build and test #62: Commit c53b9e6 pushed by trongnhanuit
1d 0h 0m 3s local_refs
local_refs
1d 0h 0m 3s
add starting nodes for searching SPRs Build and test #61: Commit 8065209 pushed by trongnhanuit
1d 0h 0m 2s local_refs
local_refs
1d 0h 0m 2s
update seekBestRoot Build and test #60: Commit df214d8 pushed by trongnhanuit
1d 0h 0m 1s local_refs
local_refs
1d 0h 0m 1s
Change to Windows 2022 for Github Action Build and test #59: Commit c68a1db pushed by trongnhanuit
1d 0h 0m 2s main
main
1d 0h 0m 2s
Update Windows runner version to 2022 Build and test #58: Commit 8b7ff7b pushed by trongnhanuit
1d 0h 0m 4s main
main
1d 0h 0m 4s
fix compilation error for cmaple-aa Build and test #57: Commit bc4f08e pushed by trongnhanuit
1d 0h 0m 2s main
main
1d 0h 0m 2s
don't support rate variation for protein models Build and test #56: Commit 3b4d3f7 pushed by trongnhanuit
1d 0h 0m 2s main
main
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Merge branch 'Sam_main' into main_clone Build and test #55: Commit 2085c2d pushed by trongnhanuit
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main
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Merge branch 'Sam_main' into main_clone Build and test #54: Commit 2085c2d pushed by trongnhanuit
1d 0h 0m 2s main_clone
main_clone
1d 0h 0m 2s