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1. cutTag-pipeline cutTag-pipeline Public

   Pipeline for Cut&Tag analysis

   R 24 7

2. gopeaks gopeaks Public

   Peak caller for CUT&TAG data

   Go 29 2

3. atac_seq atac_seq Public

   process and analyze paired-end ATAC-Seq data

   R 3 1

4. rna_seq rna_seq Public

   RNA-Seq pipeline for bulk, paired-end data

   R 3

5. cite_seq cite_seq Public

   Process CITE-Seq data using Seurat. Steps include pre-processing, sample clustering, sample integration, and group clustering.

   Python 3

6. Bulk-RNA-seq-pipeline-SE Bulk-RNA-seq-pipeline-SE Public

   Analyze single-end RNA-Seq data

   R