Skip to content

Soft-mask (just for topology) 486P site 23018 #1060

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
corneliusroemer wants to merge 1 commit into
base: master
Choose a base branch
from
Open

Soft-mask (just for topology) 486P site 23018 #1060

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 1 addition & 1 deletion defaults/parameters.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -68,7 +68,7 @@ files:
clades: "defaults/clades.tsv"
emerging_lineages: "defaults/emerging_lineages.tsv"
mutational_fitness_distance_map: "defaults/mutational_fitness_distance_map.json"
sites_to_mask: "defaults/sites_ignored_for_tree_topology.txt"
sites_to_mask: "defaults/sites_ignored_for_tree_topology.txt" # these are the soft-masked sites, just for topology
rbd_level_definitions: "defaults/rbd_levels.yaml"

# Define genes to translate during alignment by nextalign.
Expand Down
1 change: 1 addition & 0 deletions defaults/sites_ignored_for_tree_topology.txt
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -2,6 +2,7 @@
21987
22992
23012
23018
23063
23604
24410