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@LuckyMD LuckyMD commented Jul 18, 2022

Submission type

  • This submission adds a new dataset
  • This submission adds a new method
  • This submission adds a new metric
  • This submission adds a new task
  • This submission adds a new Docker image
  • This submission fixes a bug (link to related issue: )
  • This submission adds a new feature not listed above

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  • This submission was written on a forked copy of SingleCellOpenProblems
  • GitHub Actions "Run Benchmark" tests are passing on this base branch of this pull request (include link to passed test: )
  • If this pull request is not ready for review (including passing the "Run Benchmark" tests), I will open this PR as a draft (click on the down arrow next to the "Create Pull Request" button)

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  • This submission follows the guidelines in our Contributing document
  • I have checked to ensure there aren't other open Pull Requests for the same update/change

PR review checklist

This PR will be evaluated on the basis of the following checks:

  • The task addresses a valid open problem in single-cell analysis
  • The latest version of master is merged and tested
  • The methods/metrics are imported to __init__.py and were tested in the pipeline
  • Method and metric decorators are annotated with paper title, year, author, code version, and date
  • The README gives an outline of the methods, metrics and datasets in the folder
  • The README provides a satisfactory task explanation (for new tasks)
  • The sample test data is appropriate to test implementation of all methods and metrics (for new tasks)

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LuckyMD commented Jul 18, 2022

Not sure what code version to use here... xgboost or scvi-tools. I guess mostly the latter is used... or can I quote both versions?

Also, forgot to do this on my own fork :/.

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LuckyMD commented Jul 18, 2022

Now also on my fork, here: LuckyMD#8

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LuckyMD commented Jul 18, 2022

Will redo PR from my fork

@LuckyMD LuckyMD closed this Jul 18, 2022
@scottgigante-immunai scottgigante-immunai deleted the scvi-scarches-xgb branch December 3, 2022 02:52
@scottgigante-immunai scottgigante-immunai restored the scvi-scarches-xgb branch December 3, 2022 02:52
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