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1. agentic-ai-lab agentic-ai-lab Public

   Advanced multi-agent research system for autonomous scientific discovery. Features collaborative workflows (planning, research, writing, editing), tool integration (arXiv, PubMed, web search), and …

   Jupyter Notebook

2. llm-lab llm-lab Public

   A research sandbox for LLM pretraining, fine-tuning (SFT, DPO, RLHF), and alignment techniques. Designed for developing LLM-based solutions in computational biology.

   Python

3. causal-bio-lab causal-bio-lab Public

   Causal ML for drug discovery: treatment effect estimation, causal graphs, propensity score methods, and perturbation response prediction.

   Jupyter Notebook

4. genai-lab genai-lab Public

   Generative AI for Computational Biology: R&D for foundation models and generative methods toward accelerating drug discovery, understanding treatment responses, and enabling in silico biological ex…

   Python

5. biographlab biographlab Public

   A modular research framework for Geometric Deep Learning in Computational Biology

   Jupyter Notebook

6. meta-spliceai meta-spliceai Public

   Meta-learning framework for variant-induced alternative splice site detection with multimodal sequence analysis

   Python