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Name of the tool: DOTools_py

Short description: Convenient and user-friendly package to streamline common workflows in single-cell RNA sequencing data analysis. It provides high-level wrappers and visualisation utilities to help efficiently preprocess, analyse, and interpret single-cell data.

How does the package use scverse data structures (please describe in a few sentences): XXX

  • The code is publicly available under an OSI-approved license
  • The package provides versioned releases
  • The package can be installed from a standard registry (e.g. PyPI, conda-forge, bioconda)
  • Automated tests cover essential functions of the package and a reasonable range of inputs and conditions [^1]
  • Continuous integration (CI) automatically executes these tests on each push or pull request [^2]
  • The package provides API documentation via a website or README[^3]
  • The package uses scverse datastructures where appropriate (i.e. AnnData, MuData or SpatialData and their modality-specific extensions)
  • I am an author or maintainer of the tool and agree on listing the package on the scverse website

Recommended

  • Please announce this package on scverse communication channels (zulip, discourse, twitter)

  • Please tag the author(s) these announcements. Handles (e.g. @scverse_team) to include are:

    • Zulip:
    • Discourse:
    • Mastodon:
    • Bluesky:
    • Twitter:
  • The package provides tutorials (or "vignettes") that help getting users started quickly

  • The package uses the scverse cookiecutter template.

@davidrm-bio
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davidrm-bio commented Nov 18, 2025

Hello,

I am was checking the report generated and I am getting an error from another package:

[11/18/25 13:18:05] INFO     INFO:ecosystem_scripts._lo validate_registry.py:119
                             gging:Validated GitHub                             
                             users: ['rcannood']                                
                    ERROR    ERROR:ecosystem_scripts._lo validate_registry.py:48
                             gging:Validation error:                            
                             ValidationError(msg="anndat                        
                             a-for-R: Failed to validate                        
                             CRAN package 'anndata'                             
                             (error 500)")

How could I solve this issue?

EDIT: Okay, cloudflare is down, maybe this is the reason. I'll try again once they solve the issue

@grst
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grst commented Nov 18, 2025

Hi @davidrm-bio,

this failure is unrelated. Please ignore it for now.

@grst grst changed the title Create meta.yaml DOTools_py Nov 18, 2025
@mikkelnrasmussen mikkelnrasmussen changed the title DOTools_py add DOTools_py Dec 1, 2025
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3 participants