MPI warmup auto metric#821

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bbbales2 wants to merge 68 commits intompi_warmup_v2from

mpi_warmup_auto

Commits on Apr 18, 2019

Added in switching adaptation
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Commits on Apr 20, 2019

Changed 'Switching' to 'Auto'. Pointed stan submodule at modified version of Stan in personal fork that has the new adaptation stuff
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Commits on Sep 4, 2019

Merge branch 'develop' of https://github.com/stan-dev/cmdstan into experimental/warmup-auto
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Commits on Sep 11, 2019

Updated submodule
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Commits on Jan 8, 2020

update submodule
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Commits on Jan 15, 2020

update submodule that works with radon model
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stdout with 5-core run
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update submodule
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fix gitmodules
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update submodule
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update submodule
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add radon example readme
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Commits on Jan 22, 2020

Commits on Jan 23, 2020

Commits on Jan 24, 2020

Commits on Jan 26, 2020

update submodules
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Commits on Jan 28, 2020

update submodule
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Commits on Jan 29, 2020

update submodule
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mpi_warmup.mk in makefile. use MPI_ADAPTED_WARMUP = 1 in make/local
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update submodule
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update randon model readme
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Commits on Jan 30, 2020

cross_chain_window as adapt argument
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update doc
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typo
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adapt cross_chain_ess argument
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sblrc-blr model example
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fix MPI output file name
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cross_chain_rhat argument
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Commits on Jan 31, 2020

default num_cross_chains to nb. of procs, err out when less
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Commits on Feb 4, 2020

Commits on Feb 5, 2020

update submodule
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Commits on Feb 6, 2020

update submodule
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Commits on Feb 7, 2020

init commit mpi_warmup_v2
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point submodule to stan mpi_warmup_v2
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update submodule
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Commits on Feb 10, 2020

mpi warmup for dense_e nuts
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update submodule
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Commits on Feb 11, 2020

cross-chain modify chain id instead of chain seed
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default cross_chain_ess to 200
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update submodule
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update submodule
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Commits on Feb 12, 2020

update submodule
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Commits on Feb 13, 2020

update submodule
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Commits on Feb 15, 2020

Commits on Feb 17, 2020

auto metric might be working
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Commits on Feb 18, 2020

Commits on Feb 24, 2020

croos-chain warmup
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cross-chain warmup
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Merge branch 'mpi_warmup_v2' into mpi_warmup_framework
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cleanup model examples results
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Commits on Feb 25, 2020

Commits on Feb 26, 2020

Commits on Feb 28, 2020