Chromatin accessibility analysis of spaceflight (NASA) mouse brains using ArchR (Master's Thesis Project)
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Updated
Jul 2, 2023 - R
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archr
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An R/ArchR pipeline for single-cell ATAC-seq analysis, producing accessibility embeddings, visualizations, and a report-style set of results with renv-based environment management.
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Dec 30, 2025 - R
archR: Identifying promoter sequence architectures de novo using NMF
r scikit-learn discovery r-package nmf unsupervised-machine-learning non-negative-matrix-factorization sequence-architectures promoter-sequence-architectures archr
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Jul 1, 2021 - R
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