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  1. greninger-lab/HRV_Within-host greninger-lab/HRV_Within-host Public

    Files and pipelines used to generate figures

    PostScript

  2. greninger-lab/T.Pallidum-Seattle_2021-22 greninger-lab/T.Pallidum-Seattle_2021-22 Public

    R

  3. greninger-lab/RAVA_Pipeline greninger-lab/RAVA_Pipeline Public

    RAVA (Reference-based Analysis of Viral Alleles) is a Nextflow-based pipeline for non-longitudinal viral NGS data that generates interactive browser visualizations and aggregate mutation tables.

    Python 1

  4. greninger-lab/Tpallidum_WGS_Pipeline greninger-lab/Tpallidum_WGS_Pipeline Public

    Nextflow 2

  5. greninger-lab/TPRK-Pipeline greninger-lab/TPRK-Pipeline Public

    HTML