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@ucsd-ccbb

UC San Diego Center for Computational Biology & Bioinformatics

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  1. visJS2jupyter visJS2jupyter Public

    visJS2jupyter is a tool to bring the interactivity of networks created with vis.js into jupyter notebook cells

    Jupyter Notebook 78 16

  2. VAPr VAPr Public archive

    VAPr: A Python package for NoSQL variant data storage, annotation and prioritization

    Python 37 3

  3. NetColoc NetColoc Public

    development of network co-localization tool

    Jupyter Notebook 14 6

  4. C-VIEW C-VIEW Public

    This software implements a high-throughput data processing pipeline to identify and charaterize SARS-CoV-2 variant sequences in specimens from COVID-19 positive hosts or environments.

    Python 11 2

  5. cirrus-ngs cirrus-ngs Public

    Python 8 3

  6. gsia gsia Public archive

    Gene Set Information Analysis

    R 7 1

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