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taxassign bug

Status: Open.

#36 In aitgon/vtam;

· BanaIbrahim opened on Mar 27, 2024

Suitability for ONT data?

Status: Open.

#34 In aitgon/vtam;

· dgslos opened on Oct 18, 2023

Getting ValueError when running taxassign with NCBI db

Status: Open.

#32 In aitgon/vtam;

· MarionDFO opened on Apr 25, 2023

coi_blast_db error

Status: Open.

#30 In aitgon/vtam;

· meglecz opened on Jul 7, 2022

Do not use 70% and 75% identity for taxassign

Status: Open.

#23 In aitgon/vtam;

· meglecz opened on Nov 22, 2021

Refine taxassign algo

Status: Open.

#22 In aitgon/vtam;

· meglecz opened on Nov 22, 2021

Variant sequences in double

Status: Open.

#21 In aitgon/vtam;

· meglecz opened on Nov 22, 2021

Add parameter --fastq_maxdiffpct parameter for merge

Status: Open.

#13 In aitgon/vtam;

· meglecz opened on May 3, 2021

Intermittent error when using taxassign with ncbi_nt

Status: Open.

#11 In aitgon/vtam;

· meglecz opened on May 1, 2021

taxassign qcov_hsp_perc

bugSomething isn't workingSomething isn't working

Status: Open.

#10 In aitgon/vtam;

· meglecz opened on Apr 30, 2021

Error taxonomy

enhancementNew feature or requestNew feature or request

Status: Open.

#8 In aitgon/vtam;

· meglecz opened on Apr 26, 2021

Check sample names at the beginning of each command

enhancementNew feature or requestNew feature or request

Status: Open.

#7 In aitgon/vtam;

· meglecz opened on Apr 21, 2021